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nf-core

The nf-core framework tools, to create, check and develop best-practice guidelines for Nextflow.

More information.

• List existing pipelines on nf-core:

nf-core list

• Create a new pipeline skeleton:

nf-core create

• Lint the pipeline code:

nf-core lint {path/to/directory}

• Bump software versions in pipeline recipe:

nf-core bump-version {path/to/directory} {new_version}

• Launch an nf-core pipeline:

nf-core launch {pipeline_name}

• Download an nf-core pipeline for offline use:

nf-core download {pipeline_name}

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