💾 Archived View for thebird.nl › gn-gemtext-threads › issues › probeset-metadata-upload.gmi captured on 2023-07-10 at 13:42:50. Gemini links have been rewritten to link to archived content
-=-=-=-=-=-=-
Probeset metadata is the only significant metadata that remains to be uploaded. Uploading using SPARQL'S endpoint (either using CURL or the load-rdf script) doesn't work. As such, I'll have to work out a different way to upload this metadata. Here's the current size of the datasets I'm trying to upload:
bonfacem@tux02:/export3/local/home/bonfacem/dump-genenetwork-database$ ls -lah data/ total 3.2G drwxr-xr-x 2 bonfacem bonfacem 4.0K Jun 16 08:04 . drwxr-xr-x 9 bonfacem bonfacem 4.0K Jun 15 07:04 .. -rw-r--r-- 1 bonfacem bonfacem 1.2G Jun 16 07:48 dump-probeset-0.ttl -rw-r--r-- 1 bonfacem bonfacem 1014M Jun 16 08:04 dump-probeset-1.ttl -rw-r--r-- 1 bonfacem bonfacem 1009M Jun 16 08:18 dump-probeset-2.ttl
This has been resolved in:
Add dirs-allowed to virtuoso configs
The public-sparql and genenetwork-development containers were re-built to apply the above changes.