💾 Archived View for thebird.nl › gn-gemtext-threads › issues › genenetwork1 › gn1-mapping-broken.gmi captured on 2023-01-29 at 03:10:22. Gemini links have been rewritten to link to archived content

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⬅️ Previous capture (2022-04-28)

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Marker mapping

Marker regression is broken with

Traceback (most recent call last):
  File "/gnshare/gn/web/webqtl/cmdLine/webqtlCmdLine.py", line 170, in ?
    page = MarkerRegressionPage.MarkerRegressionPage(fd)
  File "/gnshare/gn/web/webqtl/cmdLine/../markerRegression/MarkerRegressionPage.py", line 203, in __init__
    resultstable,tblobj,bottomInfo  = self.GenReport(ChrNameOrderIdDict,fd, _genotype, _strains, _vals, _vars)
  File "/gnshare/gn/web/webqtl/cmdLine/../markerRegression/MarkerRegressionPage.py", line 438, in GenReport
    qtlresults = _genotype.regression(strains = _strains, trait = _vals)
AttributeError: 'genotype' object has no attribute 'regression'

Tags

• assigned: zachs, pjotrp
• type: bug
• priority: high
• status: closed
• keywords: marker,GN1

Info

Works on production now.