💾 Archived View for thebird.nl › gn-gemtext-threads › issues › variant-browser-using-mm9.gmi captured on 2022-04-28 at 17:32:10. Gemini links have been rewritten to link to archived content

View Raw

More Information

-=-=-=-=-=-=-

Variant Browser seems to be using mm9

Tags

Members

Description

From GitHub

When looking for SNPs in GN2, the gene annotations (and, I think, the SNPs) of the results do not match the query.

Searching for a gene gives correct coordinates in the search box at http://www.genenetwork.org/snp_browser, but the results are for the same coordinates in mm9 (see screenshot).

The example is for a search for 'Snx6' (chr12 54.746356 - 54.795662).

Screenshot